Category Archives: Bioinformatics

CellMissy: Cell Migration Invasion Storage System

CellMissy is a cross-platform data management system for cell migration/invasion data that simplifies and fully automates data management, storage and analysis, from experimental set-up to data visualization and exploration. CellMissy is a client-server application with a graphical user interface on … Continue reading

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Pathomx

Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis. The software … Continue reading

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Unipro UGENE

A free open-source cross-platform bioinformatics tool. It integrates dozens of well-known biological tools and algorithms, providing both graphical user and command line interfaces. Using UGENE Workflow Designer, one can arrange the required tools and algorithms into a workflow schema. Find … Continue reading

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GENtle2

An updated, open source (MPL 2.0), web-based version of GENtle. Find GENtle2 at: http://gentledna.org

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Bio-Linux 7 – NEBC

Bio-Linux 7 is a fully featured, powerful, configurable and easy to maintain bioinformatics workstation. Bio-Linux provides more than 500 bioinformatics programs … Find Bio-Linux 7 – NEBC at: http://nebc.nerc.ac.uk/tools/bio-linux/bio-linux-7-info

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BioBike

A platform for knowledge-based computational biology. Written in Lisp, downloadable or accessible through our web servers. Find BioBike at: http://biolisp.org

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Biocatalogue

The BioCatalogue is a registry of biological Web Services. The BioCatalogue website is freely accessible to the world as it is searchable and indexable to search engines. It provides an open platform for biological Web Services registration, annotation and monitoring. … Continue reading

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Taverna Workbench and Server

Taverna is an open source domain independent Workflow Management System a suite of tools used to design and execute scientific workflows. Taverna has been created by the myGrid project and funded through the OMII-UK. Taverna has a guaranteed funding till … Continue reading

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PhyloSort

A Java tool to sort phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units. Find PhyloSort at: http://phylosort.sourceforge.net

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VLinux

VLinux is a Linux Live CD for Bioinformatics. It contains various sequence and structure analysis tools. The following packages are included in the present VLinux distribution. EMBOSS,GDE,Rasmol,PyMOL,GROMACS,Phylip,Arka/Genpak,ClustalW/ClustalX,TCoffee, Seaview,Garlic, Ramachandran Plot viewer, Primer, XMolCalc, NJPlot etc Find VLinux at: http://bioinformatics.org/vlinux

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